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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs11120059 chr1:213060011 G/A LQK1 chr1:213029947-213031480:- 0.83 9.05 2.92E-12 Box Plot
ACC rs11120060 chr1:213062180 G/A LQK1 chr1:213029947-213031480:- 0.86 9.69 3.06E-13 Box Plot
ACC rs11120062 chr1:213064718 G/A LQK1 chr1:213029947-213031480:- 0.73 6.32 6.05E-8 Box Plot
ACC rs111232735 chr14:64390694 T/TTA SYNE2 chr14:64319701-64693151:+ 1.03 5.3 2.41E-6 Box Plot
ACC rs11123765 chr2:99768064 T/C TSGA10 chr2:99613724-99771427:- 0.56 5.5 1.15E-6 Box Plot
ACC rs11123770 chr2:99825102 A/G TSGA10 chr2:99613724-99771427:- 0.54 5.27 2.69E-6 Box Plot
ACC rs111242996 chr7:72279827 G/A TYW1B chr7:72023729-72298777:- 1.24 8.3 4.23E-11 Box Plot
ACC rs11125869 chr2:61379533 A/G C2orf74 chr2:61372203-61391964:+ 0.64 6.39 4.64E-8 Box Plot
ACC rs11125870 chr2:61379625 G/C C2orf74 chr2:61372203-61391964:+ 0.64 6.39 4.64E-8 Box Plot
ACC rs11128927 chr3:19988437 G/C EFHB chr3:19920964-19988517:- 0.82 7.78 2.8E-10 Box Plot
ACC rs111308233 chr2:61676389 TAA/T C2orf74 chr2:61372203-61391964:+ 0.6 5.73 5.18E-7 Box Plot
ACC rs11135482 chr5:96221426 A/G ERAP2 chr5:96211643-96255420:+ 0.84 8.06 1.01E-10 Box Plot
ACC rs11135484 chr5:96221889 C/T ERAP2 chr5:96211643-96255420:+ 0.72 6.17 1.05E-7 Box Plot
ACC rs11135485 chr5:96286969 C/G ERAP2 chr5:96211643-96255420:+ 0.87 9.38 9.13E-13 Box Plot
ACC rs111391035 chr7:64491188 GAGA/G INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot